Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853360.1_cds_XP_016512236.1_24898
CDS Infomation

[gene=LOC107829275] [db_xref=GeneID:107829275] [protein=RNA-directed DNA methylation 4-like isoform X3] [protein_id=XP_016512236.1] [location=join(82281..82383,82479..82559,83050..83141,83279..83350,83446..83487,84754..84905,85016..85134,85423..85498,85587..85660,85761..86014)] [gbkey=CDS]
Sequence

ATGGCTGCAGTCGCCGAGAGTTCTTCAGCTCCGTCGAAGGAAGACAAGCCCGTCATTGTT
AGGGTTAAGAGAAAAACTTTCCAGTCTCGCCTCGACGCTTTCTGGCTCGAAATCAACGAG
AGGCCATTGAAACGACCGTTGCTTGACTTTGAGAAGCTTTCAATATCTGATTCTTCAAGT
AGAGTGGAGGAATTGAAGAGCAGAAAGGTTCTTGTGCGGCATGTGGAGACAGTAACTAGT
TCAGAGGTTACTGTTGATATCCTGAAGTCGTTTGCGCAGTCGGCTCCAGCAGATGCTTCG
GAAGTCAAAGAGAAAGCTGAGATAAGGCGAAGTTTTAGGGCAGAAAATAAACAAGATCAA
CTACTTGCCAAGGCTAAGCAAAAGCAAGAGGATTTATCAAAAAATGCCCGGTTTGAGCAA
ATATGGAAAAGCAGAAAAGAAAAGAAAAAACTAATGCATGACGAAGAGCTGAATGAGATG
TGTCGACTATATGATGTTATTCGTGTTGATACTGAAGAAACAAAGCATGAAGTGCAAGAG
GGGACTACCGAGTTAGAAGATCATAGGATGATGTCCCAATATTTGCCTCTCTTACGAGAA
GTCATGCCAAGTGCTGCTGAAGAAATTGAGTCAGAGATTCATAATTACAAGGCCAAACAA
GATGGTTATGTATATGATTACTATGCTGTTAAGGGTGATACCAACACTGGCGAAGATATT
GCTAGCCCTTTCCCATTGGTACAGGTTGATGATGATGATGACTACTGTGATGGTCCTGAT
TATTCAGACAACGAATCTGATGATTCCAATGCTGAACACAATCCCTGGAATGATTATCCA
GATGAAGAGGAATCTGAAGATGAGGATGAGGATGAAGATGAAACCCAGTCATCAGAAGTT
TTAAGCAGCACTTCTCAGGACCAATATGGATCTGAAACTGTTGGTGTAATTTCTTTTCAA
AATGAGGATGTGGGCCGCGAGGACTGGTCAGATTATGCAGATCCATTAGTTGATGGTGAG
TCCGATAGTGAAGCTTACGATGATGATGATGAAGACATATGGTGA

Peptide Sequence

PEP ID

XP_016512236.1
PEP Infomation

PREDICTED: RNA-directed DNA methylation 4-like isoform X3 [Nicotiana tabacum]
Sequence

MAAVAESSSAPSKEDKPVIVRVKRKTFQSRLDAFWLEINERPLKRPLLDFEKLSISDSSS
RVEELKSRKVLVRHVETVTSSEVTVDILKSFAQSAPADASEVKEKAEIRRSFRAENKQDQ
LLAKAKQKQEDLSKNARFEQIWKSRKEKKKLMHDEELNEMCRLYDVIRVDTEETKHEVQE
GTTELEDHRMMSQYLPLLREVMPSAAEEIESEIHNYKAKQDGYVYDYYAVKGDTNTGEDI
ASPFPLVQVDDDDDYCDGPDYSDNESDDSNAEHNPWNDYPDEEESEDEDEDEDETQSSEV
LSSTSQDQYGSETVGVISFQNEDVGREDWSDYADPLVDGESDSEAYDDDDEDIW

Transcript Sequence

Gene sequence data has not been registered.